Processes


sample_sheet_generator	1
demux_align
interop_metrics	1
bclconvert	8
merge_fastqs_sample_r1	20
merge_fastqs_sample_r2	20
merge_fastqs_undetermined_r1	1
merge_fastqs_undetermined_r2	1
merge_illumina_stats_lane	1
merge_reports_lane	1
align	20
adapter_removal	20
parse_fastq_filename	20
qc
sample_depth	20
seq_qc_subwf
read_qc_script	20
reads_per_target_script	20
gc_bias_script	20
gc_bias_plots	20
depth_stats_script	20
saturation_plot_script	20
saturation_metric_script	20
fragment_size_script	20
contamination_script	20
merge_qc	1
mutation_rates	20
enrichment_statistics	1
bam_postprocess	20
postprocess_metrics	20
log_bam_postprocess_error_and_fail
log_postprocess_metrics_error_and_fail
list_failed_tasks	1